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ENH: add action to collate fastp reports #1
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Copilot reviewed 20 out of 33 changed files in this pull request and generated no comments.
Files not reviewed (13)
- .coveragerc: Language not supported
- .gitattributes: Language not supported
- .github/workflows/q2-ci.yaml: Language not supported
- MANIFEST.in: Language not supported
- Makefile: Language not supported
- setup.cfg: Language not supported
- setup.py: Evaluated as low risk
- q2_fastp/plugin_setup.py: Evaluated as low risk
- conda-recipe/meta.yaml: Evaluated as low risk
- q2_fastp/init.py: Evaluated as low risk
- q2_fastp/tests/test_fastp.py: Evaluated as low risk
- q2_fastp/utils.py: Evaluated as low risk
- .github/workflows/ci-dev.yaml: Evaluated as low risk
Comments suppressed due to low confidence (1)
q2_fastp/tests/test_utils.py:30
- Add a test case to check the behavior of 'collate_fastp_reports' when the 'reports' argument is empty.
def test_collate(self, p):
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Hey everything looks good to me.
This PR:
collate-fastp-reports
action for combining the reports generated by fastp